DNA sequencing-Canada

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To download chromatogram-viewing software: CLICK HERE


Turnaround time

The following turnaround time for single strand sequencing is based on a DNA template sample of acceptable quality and on our current operational capacity: 1 day for samples requiring 1-2 reactions; average sequencing speed is 4 to 6 kb per week.

Fees and conditions

1) One run:

$28.00 per reaction, up to 1200 bases.

 

2) Sequencing large inserts:

6.0 cents per base for inserts requiring more than two reactions to cover insert length (primer walking). Internal walking primer: $28 each (including design and synthesis); $15 for the same primer that can be used for more than one clone.

 

3) Editing fee:

No charge for single-strand sequencing. An editing fee of $7.50 per 500 bases applies for double strand sequencing. All sequences are confirmed and edited against the complementary strand, pair by pair.

 

4) G-C rich sample:

When the G-C content is higher than 65%, or the insert contains very strong secondary structures that will affect the normal sequencing procedure, additional fees (primers or/and reactions) will be added, upon customer approval.

 

5) Data quality:

For the above price and with a normal insert, an accuracy of >99.00% (Li-Cor standard) is guaranteed for single strand sequencing while a 100% match is guaranteed for double strand sequencing. However, sequencing quality is directly related to the sequence make-up of the insert and the quality of the sample.



Sample Requirements and Recommendations

Template

Preparation: Use of Qiagen kits, phenol-chloroform extraction or CsCl-density gradient centrifugation is recommended. If total size (insert + vector) is >7 Kb, a maxi-prep is recommended. Purity: A 260/280 ratio and an agarose gel picture of digested and undigested DNA samples should be provided. Shipping conditions: Plasmid DNA can be sent in dry form, in water or in a buffer solution. PCR products must be submitted in a dry state or in 70% ethanol to prevent degradation.


Sample Quantity and Concentration

Requested quantity of template for a single reaction is approximately 0.3 picomoles. The corresponding amount is about 200ng/1Kb of total size (insert + vector). Alternatively, the amount in ml can be calculated using the below formula. Please note that although our read-length for a single reaction can reach up to 1,200 bases under ideal conditions, the amount of template should be calculated assuming a read-length of 700-900 bases. Also, please note that 2 to 3 times of the required amount might be required in case of repeated sequencing reactions.

0.195 x Total size (Kb) / Sample concentration [ug/ul] = ul of sample needed for 1 reaction

NOTE: It is recommended that the DNA concentration be estimated by running a gel (more accurate than a spectrometer reading). Ideal concentration is >0.5 mg/ml. If concentration is too low this will result in a blank signal or the signal will be lost in the background. Clients bear responsibility for the descriptions of their sample(s).

Pick-up service

Please contact us at 514.633.6006 for our courrier account number 24 hours prior to pick-up. A local shipping fee of $10.00 will be charged. This fee is waived for an order of $250.00 or more before taxes.

Please contact us for our account number with FedEx prior to pick-up.

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